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Proteomic Profiling And Analytical Chemistry

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Proteomic Profiling and Analytical Chemistry

Proteomic Profiling and Analytical Chemistry Book
Author : Pawel Ciborowski,Jerzy Silberring
Publisher : Elsevier
Release : 2016-03-02
ISBN : 0444636900
Language : En, Es, Fr & De

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Book Description :

Proteomic Profiling and Analytical Chemistry: The Crossroads, Second Edition helps scientists without a strong background in analytical chemistry to understand principles of the multistep proteomic experiment necessary for its successful completion. It also helps researchers who do have an analytical chemistry background to break into the proteomics field. Highlighting points of junction between proteomics and analytical chemistry, this resource links experimental design with analytical measurements, data analysis, and quality control. This targeted point of view will help both biologists and chemists to better understand all components of a complex proteomic study. The book provides detailed coverage of experimental aspects such as sample preparation, protein extraction and precipitation, gel electrophoresis, microarrays, dynamics of fluorescent dyes, and more. The key feature of this book is a direct link between multistep proteomic strategy and quality control routinely applied in analytical chemistry. This second edition features a new chapter on SWATH-MS, substantial updates to all chapters, including proteomic database search and analytical quantification, expanded discussion of post-hoc statistical tests, and additional content on validation in proteomics. Covers the analytical consequences of protein and peptide modifications that may have a profound effect on how and what researchers actually measure Includes practical examples illustrating the importance of problems in quantitation and validation of biomarkers Helps in designing and executing proteomic experiments with sound analytics

Proteomic Profiling and Analytical Chemistry

Proteomic Profiling and Analytical Chemistry Book
Author : Pawel Ciborowski,Jerzy Silberring,Jacek Namiesnik
Publisher : Elsevier Science Limited
Release : 2013-01
ISBN : 9780444593788
Language : En, Es, Fr & De

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Book Description :

Proteomic Profiling and Analytical Chemistry helps scientists without a strong background in analytical chemistry to understand basic analytical principles and apply them to proteomics profiling. In most proteomic profiling experiments, liquid chromatography is used; this method is also used widely in analytical chemistry. This book bridges the gap between overly specialized courses and books in mass spectrometry, proteomics and analytical chemistry. It also helps researchers with an analytical chemistry background to break into the proteomics field. Proteomic Profiling and Analytical Chemistry focuses on practical applications for proteomic research helping readers to design better experiments and to more easily interpret, analyze and validate the resulting data. Experimental aspects such as sample preparation, protein extraction and precipitation, gel electrophoresis, microarrays, dynamics of fluorescent dyes, and more are all covered in detail. Covers the analytical consequences of protein and peptide modifications that may have a profound effect on how and what researchers actually measure Includes practical examples illustrating the importance of problems in quantitation and validation of biomarkers Helps in designing and executing proteomic experiments with sound analytics

Odorant Binding and Chemosensory Proteins

Odorant Binding and Chemosensory Proteins Book
Author : Anonim
Publisher : Academic Press
Release : 2020-08-20
ISBN : 012821158X
Language : En, Es, Fr & De

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Book Description :

This new volume of Methods in Enzymology continues the legacy of this premier serial with quality chapters authored by leaders in the field. Provides the authority and expertise of leading contributors from an international board of authors Presents the latest release in the Methods in Enzymology series

Activity Based Protein Profiling

Activity Based Protein Profiling Book
Author : Benjamin F. Cravatt,Ku-Lung Hsu,Eranthie Weerapana
Publisher : Springer
Release : 2019-01-25
ISBN : 3030111431
Language : En, Es, Fr & De

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Book Description :

This volume provides a collection of contemporary perspectives on using activity-based protein profiling (ABPP) for biological discoveries in protein science, microbiology, and immunology. A common theme throughout is the special utility of ABPP to interrogate protein function and small-molecule interactions on a global scale in native biological systems. Each chapter showcases distinct advantages of ABPP applied to diverse protein classes and biological systems. As such, the book offers readers valuable insights into the basic principles of ABPP technology and how to apply this approach to biological questions ranging from the study of post-translational modifications to targeting bacterial effectors in host-pathogen interactions.

Green Sustainable Process for Chemical and Environmental Engineering and Science

Green Sustainable Process for Chemical and Environmental Engineering and Science Book
Author : Dr. Inamuddin,Tariq Altalhi
Publisher : Elsevier
Release : 2023-01-20
ISBN : 0323951570
Language : En, Es, Fr & De

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Book Description :

Green Sustainable Process for Chemical and Environmental Engineering and Science: Green Solvents and Extraction Technology provides information on the use of green solvents and their applications in the synthesis of pharmaceutical drugs, energy conversion and storage, catalysis, biodiesel synthesis, multicomponent reactions, waste valorization, and more. The book features introductory chapters related to the applications of green solvents and related extraction technology for sustainable development, including research trends, technical development, environment issues, and related concerns. The book provides examples covering the extraction of nanocellulose (from agricultural wastes), polysaccharides, phenolic compounds, antioxidants (from vegetables), biomolecules and green solvents (from biomass and precious metals). Provides an overview of the applicability of green solvents for sustainable development Delivers in-depth literature on the use of green solvents for industrial processes Highlights issues related to research trends, sustainable development, and the environment Focuses on extraction technology Offers an overview of the use of green solvent-based extraction Presents in-depth literature on the extraction of a variety of substances using green solvents

Issues in Industrial Applied and Environmental Chemistry 2011 Edition

Issues in Industrial  Applied  and Environmental Chemistry  2011 Edition Book
Author : Anonim
Publisher : ScholarlyEditions
Release : 2012-01-09
ISBN : 1464963770
Language : En, Es, Fr & De

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Book Description :

Issues in Industrial, Applied, and Environmental Chemistry: 2011 Edition is a ScholarlyEditions™ eBook that delivers timely, authoritative, and comprehensive information about Industrial, Applied, and Environmental Chemistry. The editors have built Issues in Industrial, Applied, and Environmental Chemistry: 2011 Edition on the vast information databases of ScholarlyNews.™ You can expect the information about Industrial, Applied, and Environmental Chemistry in this eBook to be deeper than what you can access anywhere else, as well as consistently reliable, authoritative, informed, and relevant. The content of Issues in Industrial, Applied, and Environmental Chemistry: 2011 Edition has been produced by the world’s leading scientists, engineers, analysts, research institutions, and companies. All of the content is from peer-reviewed sources, and all of it is written, assembled, and edited by the editors at ScholarlyEditions™ and available exclusively from us. You now have a source you can cite with authority, confidence, and credibility. More information is available at http://www.ScholarlyEditions.com/.

Identifying Microbes by Mass Spectrometry Proteomics

Identifying Microbes by Mass Spectrometry Proteomics Book
Author : Charles H. Wick
Publisher : CRC Press
Release : 2013-09-10
ISBN : 146650496X
Language : En, Es, Fr & De

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Book Description :

All microbes, including bacteria, viruses, and fungi, can be classified and identified by matching a few peptides known to be unique to each organism. Identifying Microbes by Mass Spectrometry Proteomics describes ways to identify microorganisms using powerful new techniques combining hardware and software and yielding highly accurate methods for detection, identification, and classification of microbes. This straightforward technology can be used to detect unknown and unsequenced microorganisms as well as microbes in complex environmental samples. This book reviews various mass analyzers used for detection and describes ionization methods frequently used for analysis of microbial constituents, a necessary step in the preparation of mass spectrometry (MS) samples. The text also discusses diverse processing methods, which are used to analyze MS files for matching mass spectral profiles, and examines protein and nucleic acid sequence-based methods capable of classification and identification of microbial agents. The book also covers sample collection methods and specific sample preparation techniques. The text addresses using computer software and bioinformatics approaches for data mining to discriminate microbes using mass spectrometry proteomics (MSP). It also discusses historical pattern recognition-based methods and other approaches such as analysis of pyrolysis products, chemical ionization (CI) of fatty acid methyl esters, and MALDI-MS. The text contains examples of the application of the MSP technique for microbe detection and includes a survey of suitable and commercially available MS-based platforms. Successful applications include the identification of unknown microbes in honey bees associated with colony collapse disorder and the analysis of virus strains from the 2009 influenza pandemic. The final chapter outlines future trends in these groundbreaking uses of MS techniques, which are fast, not limited by sample type, and show potential in answering complex environmental questions.

Advances in Biological Science Research

Advances in Biological Science Research Book
Author : Surya Nandan Meena,Milind Naik
Publisher : Academic Press
Release : 2019-05-17
ISBN : 0128174986
Language : En, Es, Fr & De

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Book Description :

Advances in Biological Science Research: A Practical Approach provides discussions on diverse research topics and methods in the biological sciences in a single platform. This book provides the latest technologies, advanced methods, and untapped research areas involved in diverse fields of biological science research such as bioinformatics, proteomics, microbiology, medicinal chemistry, and marine science. Each chapter is written by renowned researchers in their respective fields of biosciences and includes future advancements in life science research. Discusses various research topics and methods in the biological sciences in a single platform Comprises the latest updates in advanced research techniques, protocols, and methods in biological sciences Incorporates the fundamentals, advanced instruments, and applications of life science experiments Offers troubleshooting for many common problems faced while performing research experiments

Technologies to Enable Autonomous Detection for BioWatch

Technologies to Enable Autonomous Detection for BioWatch Book
Author : National Research Council,Institute of Medicine,Board on Life Sciences,Board on Health Sciences Policy
Publisher : National Academies Press
Release : 2013-12-31
ISBN : 0309292549
Language : En, Es, Fr & De

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Book Description :

The BioWatch program, funded and overseen by the Department of Homeland Security (DHS), has three main elements--sampling, analysis, and response--each coordinated by different agencies. The Environmental Protection Agency maintains the sampling component, the sensors that collect airborne particles. The Centers for Disease Control and Prevention coordinates analysis and laboratory testing of the samples, though testing is actually carried out in state and local public health laboratories. Local jurisdictions are responsible for the public health response to positive findings. The Federal Bureau of Investigation is designated as the lead agency for the law enforcement response if a bioterrorism event is detected. In 2003 DHS deployed the first generation of BioWatch air samplers. The current version of this technology, referred to as Generation 2.0, requires daily manual collection and testing of air filters from each monitor. DHS has also considered newer automated technologies (Generation 2.5 and Generation 3.0) which have the potential to produce results more quickly, at a lower cost, and for a greater number of threat agents. Technologies to Enable Autonomous Detection for BioWatch is the summary of a workshop hosted jointly by the Institute of Medicine and the National Research Council in June 2013 to explore alternative cost-effective systems that would meet the requirements for a BioWatch Generation 3.0 autonomous detection system, or autonomous detector, for aerosolized agents . The workshop discussions and presentations focused on examination of the use of four classes of technologies--nucleic acid signatures, protein signatures, genomic sequencing, and mass spectrometry--that could reach Technology Readiness Level (TRL) 6-plus in which the technology has been validated and is ready to be tested in a relevant environment over three different tiers of temporal timeframes: those technologies that could be TRL 6-plus ready as part of an integrated system by 2016, those that are likely to be ready in the period 2016 to 2020, and those are not likely to be ready until after 2020. Technologies to Enable Autonomous Detection for BioWatch discusses the history of the BioWatch program, the role of public health officials and laboratorians in the interpretation of BioWatch data and the information that is needed from a system for effective decision making, and the current state of the art of four families of technology for the BioWatch program. This report explores how the technologies discussed might be strategically combined or deployed to optimize their contributions to an effective environmental detection capability.

Proteomics in Biology

Proteomics in Biology Book
Author : Anonim
Publisher : Academic Press
Release : 2017-01-27
ISBN : 0128105356
Language : En, Es, Fr & De

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Book Description :

Proteomics in Biology, Part B, the latest volume in the Methods in Enzymology series, continues the legacy of this premier serial with quality chapters authored by leaders in the field. This volume covers research methods in proteomics. Continues the legacy of this premier serial with quality chapters that focus on proteomics Contains contributions from leading authorities

Natural Products Analysis

Natural Products Analysis Book
Author : Vladimir Havlicek,Jaroslav Spizek
Publisher : John Wiley & Sons
Release : 2014-10-13
ISBN : 1118466616
Language : En, Es, Fr & De

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Book Description :

This book highlights analytical chemistry instrumentation and practices applied to the analysis of natural products and their complex mixtures, describing techniques for isolating and characterizing natural products. • Applies analytical techniques to natural products research – an area of critical importance to drug discovery • Offers a one-stop shop for most analytical methods: x-ray diffraction, NMR analysis, mass spectrometry, and chemical genetics • Includes coverage of natural products basics and highlights antibacterial research, particularly important as efforts to combat drug resistance gain prominence • Covers instrumental techniques with enough detail for both current practitioners and beginning researchers

Proteomics Technologies and Applications

Proteomics Technologies and Applications Book
Author : Ibrokhim Y. Abdurakhmonov
Publisher : BoD – Books on Demand
Release : 2019-09-25
ISBN : 1789846102
Language : En, Es, Fr & De

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Book Description :

Proteomics Technologies and Applications reviews and describes the nature and application of molecules with proteins or peptides, and elucidates and predicts the possible molecular and physiological causes related to changing proteomic profiles. Chapters target various methods and tools available for analysis, detection, separation, quantification, and localization of cell proteomes of a biological system, which are helpful as biomarkers for various disease prognoses and diagnoses.

Advancements of Mass Spectrometry in Biomedical Research

Advancements of Mass Spectrometry in Biomedical Research Book
Author : Alisa G. Woods,Costel C. Darie
Publisher : Springer
Release : 2019-07-25
ISBN : 3030159507
Language : En, Es, Fr & De

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Book Description :

This volume explores the use of mass spectrometry for biomedical applications. Chapters focus on specific therapeutic areas such as oncology, infectious disease, and psychiatry. Additional chapters focus on methodology, technologies and instrumentation, as well as on analysis of protein-protein interactions, protein quantitation, and protein post-translational modifications. Various omics fields such as proteomics, metabolomics, glycomics, lipidomics, and adductomics are also covered. Applications of mass spectrometry in biotechnological and pharmaceutical industry are also discussed. This volume provides readers with a comprehensive and informative manual that will allow them to appreciate mass spectrometry and proteomic research, but also to initiate and improve their own work. This book acts as a technical guide as well as a conceptual guide to the newest information in this exciting field.

Food Proteomics

Food Proteomics Book
Author : Maria Lopez Pedrouso,Daniel Franco Ruiz,Jose M. Lorenzo
Publisher : Academic Press
Release : 2022-06-24
ISBN : 032390890X
Language : En, Es, Fr & De

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Book Description :

Food Proteomics: Technological Advances, Current Applications and Future Perspectives addresses many of the food proteomic issues in the industry today. Food proteomics continues to be an emerging field, becoming increasingly important in product innovation, food safety, food quality and health. The book is divided into sections describing the role of proteomics in the field of food science, conceptual background methodological aspects, and bioinformatic tools employed in the field. The book describes proteomic studies collected from the most relevant animal and vegetables species in food production and discusses important food challenges from a proteomic point-of-view. This is an essential and practical reference that provides analytical tools to help introduce technical innovations in the food industry with the latest scientific information useful and accessible to new researchers in the field as well as advanced. Includes precise proteomic information on a specific category Provides proteomic studies of the most common vegetable and animal species Presents proteomic methodologies, including bioinformatics for effective analysis in food science Discusses food challenges such as allergens, authentication and food safety

Magnetic Micro nano materials For Proteomics Analysis

Magnetic Micro  nano materials For Proteomics Analysis Book
Author : Nianrong Sun,Chunhui Deng
Publisher : World Scientific
Release : 2021-06-18
ISBN : 9811230560
Language : En, Es, Fr & De

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Book Description :

Proteomics is a study which takes the existence and activities of all proteins in cells as the research object for a more in-depth understanding of the laws of life activity. Since the concept of proteome was proposed in 1995, proteomics has achieved rapid development during the past decades. As a significant part of post-genomics, proteomics has strengthened its position and also become the forefront of scientific research in this century. Magnetic nanomaterials in proteomics analysis is an interdisciplinary field combining magnetic nanomaterials science and proteomics. From the current research, magnetic nanomaterials have shown great potential in complex proteomics research.This book focuses on the application of magnetic nanomaterials in the forefront of proteomics research, and describes in details the synthetic methods, properties, principles and performance of magnetic nanomaterials in various branches of proteomics, which includes digestion studies, enrichment of low abundance peptides, as well as the analysis of phosphoprotein and glycoprotein. Past 10 years' research on magnetic materials in proteomics is integrated, and then the application of magnetic nanomaterials in proteomics analysis are stated systematically.This book can serve as reference book for teaching in the major of proteomics analysis, and also can be reference book for researchers who are studying materials for proteomics.

Mass Spectrometry Based Chemical Proteomics

Mass Spectrometry Based Chemical Proteomics Book
Author : W. Andy Tao,Ying Zhang
Publisher : John Wiley & Sons
Release : 2019-07-10
ISBN : 1118970217
Language : En, Es, Fr & De

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Book Description :

PROVIDES STRATEGIES AND CONCEPTS FOR UNDERSTANDING CHEMICAL PROTEOMICS, AND ANALYZING PROTEIN FUNCTIONS, MODIFICATIONS, AND INTERACTIONS—EMPHASIZING MASS SPECTROMETRY THROUGHOUT Covering mass spectrometry for chemical proteomics, this book helps readers understand analytical strategies behind protein functions, their modifications and interactions, and applications in drug discovery. It provides a basic overview and presents concepts in chemical proteomics through three angles: Strategies, Technical Advances, and Applications. Chapters cover those many technical advances and applications in drug discovery, from target identification to validation and potential treatments. The first section of Mass Spectrometry-Based Chemical Proteomics starts by reviewing basic methods and recent advances in mass spectrometry for proteomics, including shotgun proteomics, quantitative proteomics, and data analyses. The next section covers a variety of techniques and strategies coupling chemical probes to MS-based proteomics to provide functional insights into the proteome. In the last section, it focuses on using chemical strategies to study protein post-translational modifications and high-order structures. Summarizes chemical proteomics, up-to-date concepts, analysis, and target validation Covers fundamentals and strategies, including the profiling of enzyme activities and protein-drug interactions Explains technical advances in the field and describes on shotgun proteomics, quantitative proteomics, and corresponding methods of software and database usage for proteomics Includes a wide variety of applications in drug discovery, from kinase inhibitors and intracellular drug targets to the chemoproteomics analysis of natural products Addresses an important tool in small molecule drug discovery, appealing to both academia and the pharmaceutical industry Mass Spectrometry-Based Chemical Proteomics is an excellent source of information for readers in both academia and industry in a variety of fields, including pharmaceutical sciences, drug discovery, molecular biology, bioinformatics, and analytical sciences.

Mass Spectrometry Based Chemical Proteomics

Mass Spectrometry Based Chemical Proteomics Book
Author : W. Andy Tao,Ying Zhang
Publisher : John Wiley & Sons
Release : 2019-09-04
ISBN : 1118969553
Language : En, Es, Fr & De

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Book Description :

PROVIDES STRATEGIES AND CONCEPTS FOR UNDERSTANDING CHEMICAL PROTEOMICS, AND ANALYZING PROTEIN FUNCTIONS, MODIFICATIONS, AND INTERACTIONS—EMPHASIZING MASS SPECTROMETRY THROUGHOUT Covering mass spectrometry for chemical proteomics, this book helps readers understand analytical strategies behind protein functions, their modifications and interactions, and applications in drug discovery. It provides a basic overview and presents concepts in chemical proteomics through three angles: Strategies, Technical Advances, and Applications. Chapters cover those many technical advances and applications in drug discovery, from target identification to validation and potential treatments. The first section of Mass Spectrometry-Based Chemical Proteomics starts by reviewing basic methods and recent advances in mass spectrometry for proteomics, including shotgun proteomics, quantitative proteomics, and data analyses. The next section covers a variety of techniques and strategies coupling chemical probes to MS-based proteomics to provide functional insights into the proteome. In the last section, it focuses on using chemical strategies to study protein post-translational modifications and high-order structures. Summarizes chemical proteomics, up-to-date concepts, analysis, and target validation Covers fundamentals and strategies, including the profiling of enzyme activities and protein-drug interactions Explains technical advances in the field and describes on shotgun proteomics, quantitative proteomics, and corresponding methods of software and database usage for proteomics Includes a wide variety of applications in drug discovery, from kinase inhibitors and intracellular drug targets to the chemoproteomics analysis of natural products Addresses an important tool in small molecule drug discovery, appealing to both academia and the pharmaceutical industry Mass Spectrometry-Based Chemical Proteomics is an excellent source of information for readers in both academia and industry in a variety of fields, including pharmaceutical sciences, drug discovery, molecular biology, bioinformatics, and analytical sciences.

The Evolution from Protein Chemistry to Proteomics

The Evolution from Protein Chemistry to Proteomics Book
Author : Roger L. Lundblad
Publisher : CRC Press
Release : 2005-10-14
ISBN : 1000654044
Language : En, Es, Fr & De

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Book Description :

Largely driven by major improvements in the analytical capability of mass spectrometry, proteomics is being applied to broader areas of experimental biology, ranging from oncology research to plant biology to environmental health. However, while it has already eclipsed solution protein chemistry as a discipline, it is still essentially an extension

Proteomics in Biomedicine and Pharmacology

Proteomics in Biomedicine and Pharmacology Book
Author : Anonim
Publisher : Academic Press
Release : 2014-07-03
ISBN : 0128005955
Language : En, Es, Fr & De

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Book Description :

Volume 95 of Advances in Protein Chemistry and Structural Biology focuses on advances in proteomic techniques and their application in biomedicine and pharmacology. This volume describes in detail the applications of these techniques in studying a number of diseases and specific protein modifications and profiles, including phosphoproteomics, glycoproteomics, and more. Published continuously since 1944, the Advances in Protein Chemistry and Structural Biology series is the essential resource for protein chemists. Each volume brings forth new information about protocols and analysis of proteins. Each thematically organized volume is guest edited by leading experts in a broad range of protein-related topics. Describes advances in application of powerful techniques in translational research (biomedicine and pharmacology) Chapters are written by authorities in their field Targeted to a wide audience of researchers, specialists, and students The information provided in the volume is well supported by a number of high quality illustrations, figures, and tables

Research in Computational Molecular Biology

Research in Computational Molecular Biology Book
Author : Terence Terry Speed,Haiyan Huang
Publisher : Springer Science & Business Media
Release : 2007-04-05
ISBN : 3540716807
Language : En, Es, Fr & De

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Book Description :

This book constitutes the refereed proceedings of the 11th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2007, held in Oakland, CA, USA in April 2007. The 37 revised full papers address all current issues in algorithmic, theoretical, and experimental bioinformatics.