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Bioinformatics For Beginners

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Bioinformatics for Beginners

Bioinformatics for Beginners Book
Author : Supratim Choudhuri
Publisher : Academic Press
Release : 2014-05-12
ISBN : 9780124104716
Language : En, Es, Fr & De

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Book Description :

Bioinformatics for Beginners provides a coherent and friendly treatment of bioinformatics for any student or scientist within biology who has not routinely performed bioinformatic analysis. The book discusses relevant principles needed to understand the theoretical underpinnings of bioinformatic analysis, and demonstrates with examples targeted analysis using freely available web-based software and publicly available databases. Eschewing non-essential information, the work focuses on principles and hands-on analysis and points to many further study options. Avoids non-essential coverage yet fully describes the field for beginners - in approximately 200 pages of text Explains the molecular basis of evolution to place bioinformatic analysis in biological context Provides useful links to the vast resource of publicly available bioinformatic databases and analysis tools Over 100 figures aid in concept discovery and illustration

Bioinformatics For Dummies

Bioinformatics For Dummies Book
Author : Jean-Michel Claverie,Cedric Notredame
Publisher : John Wiley & Sons
Release : 2006-12-18
ISBN : 0470089857
Language : En, Es, Fr & De

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Book Description :

Were you always curious about biology but were afraid to sit through long hours of dense reading? Did you like the subject when you were in high school but had other plans after you graduated? Now you can explore the human genome and analyze DNA without ever leaving your desktop! Bioinformatics For Dummies is packed with valuable information that introduces you to this exciting new discipline. This easy-to-follow guide leads you step by step through every bioinformatics task that can be done over the Internet. Forget long equations, computer-geek gibberish, and installing bulky programs that slow down your computer. You’ll be amazed at all the things you can accomplish just by logging on and following these trusty directions. You get the tools you need to: Analyze all types of sequences Use all types of databases Work with DNA and protein sequences Conduct similarity searches Build a multiple sequence alignment Edit and publish alignments Visualize protein 3-D structures Construct phylogenetic trees This up-to-date second edition includes newly created and popular databases and Internet programs as well as multiple new genomes. It provides tips for using servers and places to seek resources to find out about what’s going on in the bioinformatics world. Bioinformatics For Dummies will show you how to get the most out of your PC and the right Web tools so you’ll be searching databases and analyzing sequences like a pro!

Bioinformatics A Beginner S Guide

Bioinformatics A Beginner S Guide Book
Author : Claverie
Publisher : John Wiley & Sons
Release : 2003
ISBN : 9788126503803
Language : En, Es, Fr & De

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Book Description :

Market_Desc: · Students· Biological Scientists· Chemists· Researchers· Biomedical Professionals Special Features: · Shows how to do sophisticated bioinformatics analysis without learning UNIX first· Helps researchers choose the right bioinformatics tool, use it effectively, and interpret the results.· Guides readers to the most helpful Web resources and freely available tools· Companion Web site contains the data sets used in the hands-on examples in the book and useful links to other sites About The Book: This book is dedicated to unspecialized users starting with bioinformatics from scratch, who are familiar with some biology. It explains the important relationship between the biological sciences and information technology, points readers in the direction of the most helpful Web resources and freely available tools. Many chapters in the book are devoted to addressing specific and common biological questions, problems, and projects.

Bioinformatics for Beginners

Bioinformatics for Beginners Book
Author : Supratim Choudhuri
Publisher : Elsevier
Release : 2014-05-09
ISBN : 0124105106
Language : En, Es, Fr & De

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Book Description :

Bioinformatics for Beginners: Genes, Genomes, Molecular Evolution, Databases and Analytical Tools provides a coherent and friendly treatment of bioinformatics for any student or scientist within biology who has not routinely performed bioinformatic analysis. The book discusses the relevant principles needed to understand the theoretical underpinnings of bioinformatic analysis and demonstrates, with examples, targeted analysis using freely available web-based software and publicly available databases. Eschewing non-essential information, the work focuses on principles and hands-on analysis, also pointing to further study options. Avoids non-essential coverage, yet fully describes the field for beginners Explains the molecular basis of evolution to place bioinformatic analysis in biological context Provides useful links to the vast resource of publicly available bioinformatic databases and analysis tools Contains over 100 figures that aid in concept discovery and illustration

Beginners Guide to Bioinformatics for High Throughput Sequencing

Beginners Guide to Bioinformatics for High Throughput Sequencing Book
Author : Hugh T. W. Tan
Publisher : Unknown
Release : 2018
ISBN : 9789813230521
Language : En, Es, Fr & De

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Book Description :

Download Beginners Guide to Bioinformatics for High Throughput Sequencing book written by Hugh T. W. Tan, available in PDF, EPUB, and Kindle, or read full book online anywhere and anytime. Compatible with any devices.

Python Programming for Biology

Python Programming for Biology Book
Author : Tim J. Stevens,Wayne Boucher
Publisher : Cambridge University Press
Release : 2015-02-12
ISBN : 1316194140
Language : En, Es, Fr & De

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Book Description :

Do you have a biological question that could be readily answered by computational techniques, but little experience in programming? Do you want to learn more about the core techniques used in computational biology and bioinformatics? Written in an accessible style, this guide provides a foundation for both newcomers to computer programming and those interested in learning more about computational biology. The chapters guide the reader through: a complete beginners' course to programming in Python, with an introduction to computing jargon; descriptions of core bioinformatics methods with working Python examples; scientific computing techniques, including image analysis, statistics and machine learning. This book also functions as a language reference written in straightforward English, covering the most common Python language elements and a glossary of computing and biological terms. This title will teach undergraduates, postgraduates and professionals working in the life sciences how to program with Python, a powerful, flexible and easy-to-use language.

Beginners Guide to Bioinformatics for High Throughput Sequencing

Beginners Guide to Bioinformatics for High Throughput Sequencing Book
Author : Hugh T. W. Tan,Eric Lee
Publisher : World Scientific Publishing Company
Release : 2018-02
ISBN : 9789813231665
Language : En, Es, Fr & De

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Book Description :

Biologists find computing bewildering; yet they are expected to be able to process the voluminous data available from the machines they buy and the datasets that has accumulated in genomic databanks worldwide. It is now increasingly difficult for them to avoid dealing with large volumes of data, that goes beyond just doing manual programming. Most books in this realm are full of equations and complex code but this book gives a much gentler entry point particularly for biologists, with code snippets users can use to cut and paste, and run on their Linux or MacOSX operating system or cloud instance. It also provides a step by step installation instructions which they can easily follow. Those who are in the field of genome sequencing and already familiar with the procedures of analysis, may also find this book useful in closing some knowledge gaps. High throughput sequencing requires high throughput and high performance computing. This book provides a gentle entry to high throughput sequencing by dealing with simple skills which the average biologist is increasingly required to master. You will find this book a breeze to read, and some suggestions in this book maybe new to you, something you might want to try out.

Studyguide for Bioinformatics for Beginners

Studyguide for Bioinformatics for Beginners Book
Author : Cram101 Textbook Reviews
Publisher : Cram101
Release : 2014-06-13
ISBN : 9781497013919
Language : En, Es, Fr & De

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Book Description :

Never HIGHLIGHT a Book Again! Includes all testable terms, concepts, persons, places, and events. Cram101 Just the FACTS101 studyguides gives all of the outlines, highlights, and quizzes for your textbook with optional online comprehensive practice tests. Only Cram101 is Textbook Specific. Accompanies: 9780124104716. This item is printed on demand.

Bioinformatics Programming in Python

Bioinformatics Programming in Python Book
Author : Ruediger-Marcus Flaig
Publisher : John Wiley & Sons
Release : 2011-10-05
ISBN : 3527644903
Language : En, Es, Fr & De

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Book Description :

This first introductory book designed to train novice programmers is based on a student course taught by the author, and has been optimized for biology students without previous experience in programming. By interspersing theory chapters with numerous small and large programming exercises, the author quickly shows readers how to do their own programming, and throughout uses anecdotes and real-life examples from the biosciences to 'spice up' the text. This practical book thus teaches essential programming skills for life scientists who want -- or need -- to write their own bioinformatics software tools.

Python for Bioinformatics

Python for Bioinformatics Book
Author : Jason Kinser
Publisher : Jones & Bartlett Publishers
Release : 2010-10-25
ISBN : 1449613071
Language : En, Es, Fr & De

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Book Description :

Bioinformatics is a growing field that attracts researchers from many different backgrounds who are unfamiliar with the algorithms commonly used in the field. Python for Bioinformatics provides a clear introduction to the Python programming language and instructs beginners on the development of simple programming exercises . Ideal for those with some knowledge of computer programming languages, this book emphasizes Python syntax and methodologies. The text is divided into three complete sections; the first provides an explanation of general Python programming, the second includes a detailed discussion of the Python tools typically used in bioinformatics including clustering, associative memories, and mathematical analysis techniques, and the third section demonstrates how these tools are implemented through numerous applications.

Plant Bioinformatics

Plant Bioinformatics Book
Author : David Edwards
Publisher : Springer Science & Business Media
Release : 2008-01-07
ISBN : 1588296539
Language : En, Es, Fr & De

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Book Description :

This book aims to assist research scientists in choosing the most applicable database or bioinformatics tools to aid and promote their research in plant biotechnology. Chapters include practical examples and highlight common problems encountered in bioinformatics analysis. Further chapters are aimed at researchers developing bioinformatics databases and tools, detailing commonly applied database formats and biology-focused scripting languages.

Basics of Bioinformatics

Basics of Bioinformatics Book
Author : Rui Jiang,Xuegong Zhang,Michael Q. Zhang
Publisher : Springer Science & Business Media
Release : 2013-11-26
ISBN : 3642389511
Language : En, Es, Fr & De

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Book Description :

This book outlines 11 courses and 15 research topics in bioinformatics, based on curriculums and talks in a graduate summer school on bioinformatics that was held in Tsinghua University. The courses include: Basics for Bioinformatics, Basic Statistics for Bioinformatics, Topics in Computational Genomics, Statistical Methods in Bioinformatics, Algorithms in Computational Biology, Multivariate Statistical Methods in Bioinformatics Research, Association Analysis for Human Diseases: Methods and Examples, Data Mining and Knowledge Discovery Methods with Case Examples, Applied Bioinformatics Tools, Foundations for the Study of Structure and Function of Proteins, Computational Systems Biology Approaches for Deciphering Traditional Chinese Medicine, and Advanced Topics in Bioinformatics and Computational Biology. This book can serve as not only a primer for beginners in bioinformatics, but also a highly summarized yet systematic reference book for researchers in this field. Rui Jiang and Xuegong Zhang are both professors at the Department of Automation, Tsinghua University, China. Professor Michael Q. Zhang works at the Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

Essentials of Bioinformatics Volume I

Essentials of Bioinformatics  Volume I Book
Author : Noor Ahmad Shaik,Khalid Rehman Hakeem,Babajan Banaganapalli,Ramu Elango
Publisher : Springer
Release : 2019-03-14
ISBN : 9783030026332
Language : En, Es, Fr & De

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Book Description :

Bioinformatics is an integrative field of computer science, genetics, genomics, proteomics, and statistics, which has undoubtedly revolutionized the study of biology and medicine in past decades. It mainly assists in modeling, predicting and interpreting large multidimensional biological data by utilizing advanced computational methods. Despite its enormous potential, bioinformatics is not widely integrated into the academic curriculum as most life science students and researchers are still not equipped with the necessary knowledge to take advantage of this powerful tool. Hence, the primary purpose of our book is to supplement this unmet need by providing an easily accessible platform for students and researchers starting their career in life sciences. This book aims to avoid sophisticated computational algorithms and programming. Instead, it mostly focuses on simple DIY analysis and interpretation of biological data with personal computers. Our belief is that once the beginners acquire these basic skillsets, they will be able to handle most of the bioinformatics tools for their research work and to better understand their experimental outcomes. Unlike other bioinformatics books which are mostly theoretical, this book provides practical examples for the readers on state-of-the-art open source tools to solve biological problems. Flow charts of experiments, graphical illustrations, and mock data are included for quick reference. Volume I is therefore an ideal companion for students and early stage professionals wishing to master this blooming field.

Proteome Bioinformatics

Proteome Bioinformatics Book
Author : Shivakumar Keerthikumar,Suresh Mathivanan
Publisher : Methods in Molecular Biology
Release : 2018-12-29
ISBN : 9781493982882
Language : En, Es, Fr & De

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Book Description :

Download Proteome Bioinformatics book written by Shivakumar Keerthikumar,Suresh Mathivanan, available in PDF, EPUB, and Kindle, or read full book online anywhere and anytime. Compatible with any devices.

Essentials of Bioinformatics Volume III

Essentials of Bioinformatics  Volume III Book
Author : Khalid Rehman Hakeem,Noor Ahmad Shaik,Babajan Banaganapalli,Ramu Elango
Publisher : Springer Nature
Release : 2019-11-01
ISBN : 3030193187
Language : En, Es, Fr & De

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Book Description :

Bioinformatics is an integrative field of computer science, genetics, genomics, proteomics, and statistics, which has undoubtedly revolutionized the study of biology and medicine in past decades. It mainly assists in modeling, predicting and interpreting large multidimensional biological data by utilizing advanced computational methods. Despite its enormous potential, bioinformatics is not widely integrated into the academic curriculum as most life science students and researchers are still not equipped with the necessary knowledge to take advantage of this powerful tool. Hence, the primary purpose of our book is to supplement this unmet need by providing an easily accessible platform for students and researchers starting their career in life sciences. This book aims to avoid sophisticated computational algorithms and programming. Instead, it will mostly focus on simple DIY analysis and interpretation of biological data with personal computers. Our belief is that once the beginners acquire these basic skillsets, they will be able to handle most of the bioinformatics tools for their research work and to better understand their experimental outcomes. The third volume is titled In Silico Life Sciences: Agriculture. It focuses on plant genetic, genomic, transcriptomic, proteomic and metabolomics data. Using examples of new crop diseases-emergence, crop productivity and biotic/abiotic stress tolerance, this book illustrates how bioinformatics can be an integral components of modern day plant science research.

BIOINFORMATICS A PRACTICAL GUIDE TO THE ANALYSIS OF GENES AND PROTEINS 3RD ED

BIOINFORMATICS  A PRACTICAL GUIDE TO THE ANALYSIS OF GENES AND PROTEINS  3RD ED Book
Author : Andreas D. Baxevanis,Francis B. F. Ouellette
Publisher : Unknown
Release : 2009-07-01
ISBN : 9788126521920
Language : En, Es, Fr & De

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Book Description :

Market_Desc: This new edition is aimed at advanced undergraduate and graduate school students taking an introductory bioinformatics courses, as well as professionals in genomics, molecular biology, biochemistry, biophysics, and computational biology. According to a Science review of a previous edition, this book should be in the personal library of any biologist who uses the Internet for the analysis of DNA and protein sequence data and is invaluable to beginners and seasoned researchers alike. Special Features: · Complete, expert coverage of key principles as well as the state-of-the-art in bioinformatics· All new chapters on: Genome Annotation, Genomic Databases, Predictive Methods Using RNA Sequences, Protein Structure Prediction, and Protein-Protein Interactions· Fully redesigned, appealing design with full color throughout and larger trim size· Reorganization of chapters into five main sections following a clear, logical sequence· Inclusion of greatly expanded and more rigorous problem sets· Special boxes highlighting experimental strategies and limitations· More diagrams and flowcharts to reinforce the main text· Enhanced use of real examples· written by the top scientists in the field of bioinformatics, [this book] is the perfect choice for every molecular biology laboratory --Quarterly Review of Biology (2/e)· No background in computer science or mathematics assumed About The Book: This fully revised third edition to an already classic resource provides readers with a practical guide covering the full scope of key concepts in bioinformatics, from databases to predictive and comparative algorithms. With a new full-color, enlarged page design, this edition offers the most readable, up-to-date, and thorough introduction to the field for biologists. All new features include special boxes, enhanced use of real examples, and expanded problem sets with answers provided on the book's dedicated website (www.wiley.com/bioinformatics). A glossary and appendix of sample file formats rounds out the book's reader-friendly, 'hands-on' treatment.The chapters have been reorganized into a more logical flow, with five main sections and a concluding section offering a primer on the use of Perl. Following the editors' introduction and perspective on why bioinformatics is important.

Essentials of Bioinformatics Volume II

Essentials of Bioinformatics  Volume II Book
Author : Noor Ahmad Shaik,Khalid Rehman Hakeem,Babajan Banaganapalli,Ramu Elango
Publisher : Springer Nature
Release : 2019-10-18
ISBN : 3030183750
Language : En, Es, Fr & De

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Book Description :

Bioinformatics is an integrative field of computer science, genetics, genomics, proteomics, and statistics, which has undoubtedly revolutionized the study of biology and medicine in past decades. It mainly assists in modeling, predicting and interpreting large multidimensional biological data by utilizing advanced computational methods. Despite its enormous potential, bioinformatics is not widely integrated into the academic curriculum as most life science students and researchers are still not equipped with the necessary knowledge to take advantage of this powerful tool. Hence, the primary purpose of our book is to supplement this unmet need by providing an easily accessible platform for students and researchers starting their career in life sciences. This book aims to avoid sophisticated computational algorithms and programming. Instead, it focuses on simple DIY analysis and interpretation of biological data with personal computers. Our belief is that once the beginners acquire these basic skillsets, they will be able to handle most of the bioinformatics tools for their research work and to better understand their experimental outcomes. Our second title of this volume set In Silico Life Sciences: Medicine provides hands-on experience in analyzing high throughput molecular data for the diagnosis, prognosis, and treatment of monogenic or polygenic human diseases. The key concepts in this volume include risk factor assessment, genetic tests and result interpretation, personalized medicine, and drug discovery. This volume is expected to train readers in both single and multi-dimensional biological analysis using open data sets, and provides a unique learning experience through clinical scenarios and case studies.

Bioinformatic Algorithms

Bioinformatic Algorithms Book
Author : Miguel Rocha,Pedro G. Ferreira
Publisher : Academic Press
Release : 2018-02
ISBN : 9780128125205
Language : En, Es, Fr & De

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Book Description :

Bioinformatics Algorithms: Design and Implementation in Python provides a comprehensive book on many of the most important bioinformatics problems, putting forward the best algorithms and showing how to implement them. The book focuses on the use of the Python programming language and its algorithms, which is quickly becoming the most popular language in the bioinformatics field. Readers will find the tools they need to improve their knowledge and skills regarding algorithm development and implementation, and will also uncover prototypes of bioinformatics applications that demonstrate the main principles underlying real world applications. Presents an ideal text for bioinformatics students with little to no knowledge of computer programming Based on over 12 years of pedagogical materials used by the authors in their own classrooms Features a companion website with downloadable codes and runnable examples (such as using Jupyter Notebooks) and exercises relating to the book

Computational Biology

Computational Biology Book
Author : Röbbe Wünschiers
Publisher : Springer Science & Business Media
Release : 2013-01-30
ISBN : 3642347495
Language : En, Es, Fr & De

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Book Description :

This greatly expanded 2nd edition provides a practical introduction to - data processing with Linux tools and the programming languages AWK and Perl - data management with the relational database system MySQL, and - data analysis and visualization with the statistical computing environment R for students and practitioners in the life sciences. Although written for beginners, experienced researchers in areas involving bioinformatics and computational biology may benefit from numerous tips and tricks that help to process, filter and format large datasets. Learning by doing is the basic concept of this book. Worked examples illustrate how to employ data processing and analysis techniques, e.g. for - finding proteins potentially causing pathogenicity in bacteria, - supporting the significance of BLAST with homology modeling, or - detecting candidate proteins that may be redox-regulated, on the basis of their structure. All the software tools and datasets used are freely available. One section is devoted to explaining setup and maintenance of Linux as an operating system independent virtual machine. The author's experiences and knowledge gained from working and teaching in both academia and industry constitute the foundation for this practical approach.

Genome Data Analysis

Genome Data Analysis Book
Author : Ju Han Kim
Publisher : Springer
Release : 2019-04-30
ISBN : 9811319421
Language : En, Es, Fr & De

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Book Description :

This textbook describes recent advances in genomics and bioinformatics and provides numerous examples of genome data analysis that illustrate its relevance to real world problems and will improve the reader’s bioinformatics skills. Basic data preprocessing with normalization and filtering, primary pattern analysis, and machine learning algorithms using R and Python are demonstrated for gene-expression microarrays, genotyping microarrays, next-generation sequencing data, epigenomic data, and biological network and semantic analyses. In addition, detailed attention is devoted to integrative genomic data analysis, including multivariate data projection, gene-metabolic pathway mapping, automated biomolecular annotation, text mining of factual and literature databases, and integrated management of biomolecular databases. The textbook is primarily intended for life scientists, medical scientists, statisticians, data processing researchers, engineers, and other beginners in bioinformatics who are experiencing difficulty in approaching the field. However, it will also serve as a simple guideline for experts unfamiliar with the new, developing subfield of genomic analysis within bioinformatics.